Create an Assignment S4 class object — assignment • assignments

Constructor methods for creating an object of S4 class Assignment.

Usage

assignment(feature_data, parameters, ...)

# S4 method for tbl_df,AssignmentParameters
assignment(feature_data, parameters)

# S4 method for AnalysisData,AssignmentParameters
assignment(feature_data, parameters)

# S4 method for Analysis,AssignmentParameters
assignment(feature_data, parameters, type = c("pre-treated", "raw"))

Arguments

feature_data: a tibble or an object of S4 class AnalysisData or Analysis containing the feature intensity matrix of m/z for which to assign molecular formulas. See details.
parameters: an S4 object of class AssignmentParamters containing the parameters for molecular formula assignment
...: arguments to pass to the relevant method
type: type pre-treated or raw data on which to perform assignment when argument feature_data is of class Analysis

Value

An object of S4 class Assignment.

Examples

mf_assignments <- assignment(feature_data,assignmentParameters('FIE-HRMS'))
mf_assignments
#> 
#> assignments v1.0.2 
#> Assignment: 
#> 	 Features:		 10 
#> 	 Correlations:		 0 
#> 	 Relationships:		 0 
#>